Bio Spec Overview
Ignite Creation Date:
2025-12-24 @ 11:42 PM
Last Modification Date:
2025-12-24 @ 11:42 PM
Retention:
SAMPLES_WITHOUT_DNA
Description:
Urine samples will be collected in case of a diagnosis of UTI/rUTI. These samples will be used for the isolation of bacteria. E. coli isolates will be subjected to antimicrobial resistance testing and whole genome sequencing by Illumina short-read sequencing with a minimum sequencing depth of 50X to determine genotype O, multi-locus sequence type and the presence of virulence and resistance genes.
Section:
Urine samples will be collected in case of a diagnosis of UTI/rUTI. These samples will be used for the isolation of bacteria. E. coli isolates will be subjected to antimicrobial resistance testing and whole genome sequencing by Illumina short-read sequencing with a minimum sequencing depth of 50X to determine genotype O, multi-locus sequence type and the presence of virulence and resistance genes.